Jankun J, Specht Z, Szkudlarek M, Greenfield R, Gaikwad B, Trifonov L, Vaugeois J, Aleem AM, Basrur V, Selman SH, Zavodszky MI, Skrzypczak-Jankun E. (2006) Plasminogen activator inhibitor-1 is locked in active conformation and polymerizes upon binding ligands neutralizing its activity. International Journal of Molecular Medicine, 17(3):437-47.
Muller TA, Zavodszky MI, Feig M, Kuhn LA, Hausinger RP. (2006) Structural basis for the enantiospecificities of R- and S-specific phenoxypropionate/alpha-ketoglutarate dioxygenases. Protein Science, 6:1356-68.
Jankun J, Aleem AM, Malgorzewicz S, Szkudlarek M, Zavodszky MI, DeWitt DL, Feig M, Selman SH, Skrzypczak-Jankun E. (2006) Synthetic curcuminoids modulate the arachidonic acid metabolism of human P-12-LOX and reduce sprout formation of human endothelial cells. Molecular Cancer Therapeutics, 5(5):1371-82.
Skrzypczak-Jankun E, Borbulevych OY, Zavodszky MI, Baranski MR, Padmanabhan K, Petricek V, Jankun J. (2006) Effect of crystal freezing and small molecule binding on internal cavity size in a large protein: X-ray and docking studies of lipoxygenase at ambient and low temperature at 2.0 � resolution. Acta Cryst, D62:766-775.
Chubynsky M, Day AR, Hespenheide B, Jacobs DJ, Kuhn LA, Lei M, Menor S, Rader AJ, Thorpe MF, Whiteley W, and Zavodszky MI. (2006) Constraint theory applied to proteins. Nano-Scale Materials: From Science to Technology, edited by S.N.Sahu, R.K. Choudhury and P. Jena, Novascience, pages 77-88.
Zavodszky MI and Kuhn LA. (2005) Side-chain flexibility in protein-ligand binding: The minimal rotation hypothesis. Protein Science, 14:1104-1114.
Thorpe MF, Chubynsky M, Hespenheide B, Menor S, Day AR, Jacobs DJ, Kuhn LA, Zavodszky MI, Lei M, Rader AJ, Whiteley W. (2005) Flexibility in biomolecules. Current Topics in Physics, Edited by R.A.. Barrio and K.K. Kaski, Imperial College Press, London, Chapter 6, pages 97-112.
Zavodszky MI, Lei M, Thorpe MF, Day AR, Kuhn LA. (2004) Modeling correlated main-chain motions in proteins for flexible molecular recognition. Proteins, 57(2):243-261.
Lei M, Zavodszky MI, Kuhn LA, Thorpe MF. (2004) Sampling protein conformations and pathways. Journal of Computational Chemistry, 25(9):1133-1148.
Zavodszky MI, Sanschagrin PC, Korde RS, Kuhn LA. (2002) Distilling the essential features of a protein surface for improving protein-ligand docking, scoring, and virtual screening. Journal of Computer Aided Molecular Design, 16(12):883-902.
Howell EE, Shukla U, Hicks SN, Smiley RD, Kuhn LA, Zavodszky MI. (2001) One site fits both: A model for the ternary complex of folate +NADPH in R67 dihydrofolate reductase, a D2 symmetric enzyme. Journal of Computer Aided Molecular Design, 15(11):1035�1052.
Zavodszky M, Chen CW, Huang JK, Zolkiewski M, Wen L, Krishnamoorthi R. (2001) Disulfide bond effects on protein stability: designed variants of Cucurbita Maxima trypsin inhibitor-V. Protein Science, 10(1):149-160.
Zavodszky home page